From cfefbde3578dbe2d6169ee0673fabd384fda00d7 Mon Sep 17 00:00:00 2001 From: Zemin Ning <30898492+zning-sanger@users.noreply.github.com> Date: Fri, 18 Oct 2019 12:44:57 +0100 Subject: [PATCH] Add files via upload --- README.md | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index e457067..4fc202c 100644 --- a/README.md +++ b/README.md @@ -81,10 +81,10 @@ The genome aligner BWA (http://bio-bwa.sourceforge.net) is downloaded and compil -map genome-hic.map -plot genome-hic-length.png -file 0 \ genome-scaffhic.fasta GM12878-HiC_1.fastq.gz GM12878-HiC_2.fastq.gz genome-hic2.fasta \ - You now have - 1. Scaffolded assembly file genome-scaffhic.fasta; - 2. HiC map genome-hic.map; - 3. HiC length distribution image genome-hic-length.png + After the above two steps, You now have + 1. Scaffolded assembly file: genome-scaffhic.fasta; + 2. HiC map: genome-hic.map; + 3. HiC length distribution image: genome-hic-length.png 4. Assembly file produced in the visualization step: genome-hic2.fasta This file is not used, but it might be slightly better than genome-scaffhic.fasta The visualization results are based on genome-scaffhic.fasta