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MANIFEST
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bin/npg_mail_cron_output
bin/seqchksum_merge.pl
Build.PL
Changes
lib/npg_common/Alignment.pm
lib/npg_common/extractor/fastq.pm
lib/npg_common/roles/SequenceInfo.pm
lib/npg_common/roles/software_location.pm
MANIFEST
README
t/00-critic.t
t/00-distribution.t
t/00-pod.t
t/00-podcoverage.t
t/10-Alignment.t
t/10-extractor-fastq.t
t/10-scripts_compile.t
t/10-seqchksum_merge.t
t/40-roles-SequenceInfo.t
t/40-roles-software_location.t
t/bin/bwa
t/bin/fastqindex
t/bin/samtools
t/data/1008_1_1.fastq
t/data/1008_1_2.fastq
t/data/1008_s_1.fastq
t/data/aligners/0.010/bin/tool_in_bin_with_no_version
t/data/aligners/0.010/tool_not_in_bin_with_no_version
t/data/aligners/bin/bowtie
t/data/aligners/bin/bwa
t/data/aligners/bin/maq
t/data/aligners/bin/samtools
t/data/aligners/bin/smalt
t/data/aligners/bin/stampy.py
t/data/aligners/bin/tool_with_no_version
t/data/java
t/data/s2.fastq
t/data/seqchksum_merge/format1.sam
t/data/seqchksum_merge/format2.bam
t/data/seqchksum_merge/format3.cram
t/data/seqchksum_merge/format4.seqchksum
t/data/seqchksum_merge/group1.seqchksum
t/data/seqchksum_merge/group2.seqchksum
t/data/seqchksum_merge/merged.different.seqchksum
t/data/seqchksum_merge/merged.extra_col.seqchksum
t/data/seqchksum_merge/merged.extra_row.seqchksum
t/data/seqchksum_merge/merged.formats.seqchksum
t/data/seqchksum_merge/merged.missing_col.seqchksum
t/data/seqchksum_merge/merged.missing_row.seqchksum
t/data/seqchksum_merge/merged.seqchksum
t/data/seqchksum_merge/phix.inconstant.seqchksum
t/data/seqchksum_merge/phix.seqchksum
t/data/seqchksum_merge/target.all_comments.seqchksum
t/data/seqchksum_merge/target.extra_col.seqchksum
t/data/seqchksum_merge/target.extra_row.seqchksum
t/data/seqchksum_merge/target.missing_col.seqchksum
t/data/seqchksum_merge/target.missing_row.seqchksum
t/data/seqchksum_merge/target.seqchksum
t/data/ss1.fastq
t/data/ss1_split3.fastq
t/data/sss1.fastq
t/perlcriticrc