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1. SPIE SPIE Public

   SPlicing Interactive Environment - A tool used to view next generation sequence data with the primary purpose of identify patterns for alternative splicing.

   Java 2 1

2. swann swann Public

   A web application for querying annotated microarray data projected in the top principal components

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3. sparsematrix sparsematrix Public

   In-memory sparse matrix multiplication implemented in Java.

   Java 2 1

4. hadoopUtils hadoopUtils Public

   Hadoop utilities to perform some PCA and IRLS using the MAHOUT libraries.

   Java 2 1

5. TreeLign TreeLign Public

   Treelign is an application that visualizes a phylogenetic tree next to alignment data. It uses each position on the alignment to trace the tree to determine if the site is consistent or not.

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6. Mandelbrot Mandelbrot Public

   A revision of my highschool project to draw the mandelbrot

   Java 1