star genome

#!/bin/bash

fasta=/home/xugang/data/reference/mouse/gencode.fa
gtf=/home/xugang/data/reference/mouse/gencode.vM25.annotation.gtf
genomeout=/home/xugang/data/reference/mouse/star2
[[ -d ${genomeout} ]] || mkdir -p ${genomeout}
nohup STAR --runThreadN 18 --runMode genomeGenerate --limitGenomeGenerateRAM 122003700778 --genomeDir ${genomeout} --genomeFastaFiles ${fasta} --sjdbGTFfile ${gtf} >log.txt 2>&1 &