diff --git a/docs/Quick-Start.md b/docs/Quick-Start.md index 1461fb1..d3cfd0b 100644 --- a/docs/Quick-Start.md +++ b/docs/Quick-Start.md @@ -61,10 +61,10 @@ nav_order: 2 > > 1. (On the login node with internet connection) Run `module load apptainer` to mount the apptainer utils, if it is not installed by default. > - > 2. (On the login node with internet connection) Build th `bidseq_latest.sif` file by command `apptainer pull docker://y9ch/bidseq`. + > 2. (On the login node with internet connection) Build the `bidseq_latest.sif` file using the command `apptainer pull docker://y9ch/bidseq`. > > 3. (On the computation node) Run `apptainer run bidseq_lastest.sif -c data.yaml` to start the pipeline. - > Note that most HPC mount the direcotries in a complicated manor, so you need to find out the real path by running `realpath ./` and specific the output into `apptainer` by `apptainer run -B /the/real/path ...` + > Note that most HPC systems mount directories in a complex manner. Therefore, you need to find out the actual path by executing `realpath ./` and specify this output into `apptainer` using `apptainer run -B /the/real/path ...` {: .note }