minox fixes in vign rmd files

README.Rmd

@@ -29,7 +29,7 @@ asciicast::init_knitr_engine(
 
 # `cTOST` Overview
 
-This repository holds the `cTOST` R package. This package contains the function `tost` which provides an assessment of equivalence in the univariate framework based on the state-of-the-art Two One-Sided Tests (TOST). In addition, the package contains the functions `atost` and `dtost`, two corrective procedures applied to the TOST in the univariate framework in order to ensure the preservation of the Type I error rate at the desired nominal level and a uniform increase in power. These two functions output an assessment of equivalence in the univariate framework after their respective corrections is applied. More details can be found in Boulaguiem et al. (2023) that you can access via this [link](https://www.biorxiv.org/content/10.1101/2023.03.11.532179v3).
+This repository holds the `cTOST` R package. This package contains the function `tost` which provides an assessment of equivalence in the univariate framework based on the state-of-the-art Two One-Sided Tests (TOST). In addition, the package contains the functions `atost` and `dtost`, two corrective procedures applied to the TOST in the univariate framework in order to ensure the preservation of the Type I error rate at the desired nominal level and a uniform increase in power. These two functions output an assessment of equivalence in the univariate framework after their respective corrections is applied. More details can be found in Boulaguiem et al. (2023) that you can access via this [link](https://onlinelibrary.wiley.com/doi/10.1002/sim.9993).
 
 # Install Instructions
 
@@ -63,7 +63,7 @@ The license this source code is released under is the GNU AFFERO GENERAL PUBLIC
 
 # References
 
-Boulaguiem, Younes, Julie Quartier, Maria Lapteva, Yogeshvar N Kalia, Maria-Pia Victoria-Feser, Stéphane Guerrier, and Dominique-Laurent Couturier. 2023. "Finite Sample Adjustments for Average Equivalence Testing." Statistics in Medicine [https://onlinelibrary.wiley.com/doi/10.1002/sim.9993](https://onlinelibrary.wiley.com/doi/10.1002/sim.9993)
+Boulaguiem, Younes, Julie Quartier, Maria Lapteva, Yogeshvar N Kalia, Maria-Pia Victoria-Feser, Stéphane Guerrier, and Dominique-Laurent Couturier. 2023. "Finite Sample Adjustments for Average Equivalence Testing", *Statistics in Medicine*, [https://onlinelibrary.wiley.com/doi/10.1002/sim.9993](https://onlinelibrary.wiley.com/doi/10.1002/sim.9993).
 
 
 

README.md

@@ -16,8 +16,8 @@ framework in order to ensure the preservation of the Type I error rate
 at the desired nominal level and a uniform increase in power. These two
 functions output an assessment of equivalence in the univariate
 framework after their respective corrections is applied. More details
-can be found in Boulaguiem et al. (2023) that you can access via this
-[link](https://www.biorxiv.org/content/10.1101/2023.03.11.532179v3).
+can be found in Boulaguiem et al. (2023) that you can access via this
+[link](https://onlinelibrary.wiley.com/doi/10.1002/sim.9993).
 
 # Install Instructions
 
@@ -64,15 +64,8 @@ a synopsis of the restrictions placed upon the code.
 
 # References
 
-<div id="refs" class="references csl-bib-body hanging-indent">
-
-<div id="ref-boulaguiem2023finite" class="csl-entry">
-
 Boulaguiem, Younes, Julie Quartier, Maria Lapteva, Yogeshvar N Kalia,
 Maria-Pia Victoria-Feser, Stéphane Guerrier, and Dominique-Laurent
 Couturier. 2023. “Finite Sample Adjustments for Average Equivalence
-Testing.” *Statistics in Medicine, in Press*, 2023–03.
-
-</div>
-
-</div>
+Testing”, *Statistics in Medicine*,
+<https://onlinelibrary.wiley.com/doi/10.1002/sim.9993>.

vignettes/get_started.Rmd

@@ -9,7 +9,7 @@ vignette: >
   %\VignetteEngine{knitr::rmarkdown}
   %\VignetteEncoding{UTF-8}
 ---
-```{r, echo=FALSE}
+```{r, echo=FALSE, message=FALSE}
 library(cTOST)
 ```