From 75b082e8ee322b2ee3acfd0750c7c9eafe6c8ff6 Mon Sep 17 00:00:00 2001 From: riasc Date: Tue, 12 Mar 2024 14:39:40 -0500 Subject: [PATCH] CHANGELOG road to v0.3.0 --- .github/workflows/linting.yml | 2 +- CHANGELOG.md | 5 ++++- 2 files changed, 5 insertions(+), 2 deletions(-) diff --git a/.github/workflows/linting.yml b/.github/workflows/linting.yml index c6f475d..e319536 100644 --- a/.github/workflows/linting.yml +++ b/.github/workflows/linting.yml @@ -1,5 +1,5 @@ name: Linting -run-name: ${{ github.actor }} is testing ScanNeo2 +run-name: ${{ github.actor }} is linting ScanNeo2 on: [push] jobs: formatting: diff --git a/CHANGELOG.md b/CHANGELOG.md index 47de151..f31d79b 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,7 +5,7 @@ All notable changes to this project will be documented in this file. The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). -## [0.3.0] - 2024-03-07 +## [0.3.0] - 2024-03-12 ### Features @@ -15,6 +15,9 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 - proteome similarity (BLAST against human proteome) - Prioritization of neoantigens is now done separately for each variant type (speeds up the process) - NMD information (e.g., escape rule,...) is now also calculated for all variants +- Versioned all environments to ensure reproducibility +- Added script to allow batch processing on HPC +- HLA typing mode in config has changed to list (DNA,RNA,custom) rather than single setting (e.g., BOTH) ## [0.2.2] - 2024-03-01