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added to feature list
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riasc committed Mar 1, 2024
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Expand Up @@ -18,12 +18,15 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- mutect2 is done per chromosome and later merged
- Genotyping MHC-II works now on both single-end and paired-end
- User-defined HLA alleles are matched against the hla refset
- Added multiple routine to catch errors when only custom variants are provided
- Added additional parameters in config file

### Fix

- When using BAMfiles the HLA typing wrongly expected single-end reads and performed preprocessing
- Each environment is no thoroughly versioned to ensure interoperability
- Missing immunogenicity calculation on certain values of MHC-I fixed
- Fixed prediction of binding affinity in MHC-II (as the columns are different from MHC-I)


## [0.1.6] - 2024-02-13
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