Releases: yollct/spycone
Releases · yollct/spycone
v0.2.1
documentation update
biopython version 1.8.0
sklearn version 1.2.2
v0.2.0 - DOMINO bug
- fix DOMINO bug: remove global variable G_modularity and pass directly as arg.
- added pydot as dependencies
v0.1.8
Fix visualize clusters
Fix DOMINO
remove keytype parameters in dataset
v0.1.5
- Fix bugs in GO terms, domino
- Visualize modules with pydot. Saving image as svg.
Fix clusters visualization
Return plotly when clusters are specified, else return seaborn figure.
v0.1.3
- fix bug in detect_isoform_switch (avoid all zeros in mannwhitney u test, adapt for 2 replicates)
- gsea_plot fixed
v0.1.2
Fix array bug in preprocess
v0.0.3
Fixed bugs in isoform switch detection.
Set default biological network: biogrid human weighted with DDI