From 241a47c8c3dc7024728efe493f32c5af7a4fe5a3 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?M=C3=A1t=C3=A9=20Balajti?= <mate.balajti@unibas.ch>
Date: Tue, 23 Jan 2024 11:22:45 +0100
Subject: [PATCH] lower lib_type_mate_cutoff

---
 htsinfer/cli.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/htsinfer/cli.py b/htsinfer/cli.py
index 217d6ce..6850600 100644
--- a/htsinfer/cli.py
+++ b/htsinfer/cli.py
@@ -232,7 +232,7 @@ def __call__(
         dest="lib_type_mates_cutoff",
         metavar="FLOAT",
         type=float,
-        default=0.95,
+        default=0.85,
         help=(
             "minimum fraction of mates that can be mapped to compatible loci "
             "and are considered concordant pairs / all mates"