update readme, gitignore

zavolanlab · Nov 9, 2023 · 59ace85 · 59ace85
1 parent 6d35935
commit 59ace85
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diff --git a/.gitignore b/.gitignore
@@ -117,3 +117,4 @@ tests/.DS_Store
 results_htsinfer
 .snakemake
 tests/cluster_tests/results_sra_downloads
+*.out
diff --git a/README.md b/README.md
@@ -109,6 +109,7 @@ htsinfer [--output-directory PATH]
          [--library-type-mates-cutoff FLOAT]
          [--read-orientation-min-mapped-reads INT]
          [--read-orientation-min-fraction FLOAT]
+         [--org-id INT]
          [--verbosity {DEBUG,INFO,WARN,ERROR,CRITICAL}]
          [-h] [--version]
          PATH [PATH]