diff --git a/tests/test_get_read_orientation.py b/tests/test_get_read_orientation.py index ddd9fb6..b73b8e2 100644 --- a/tests/test_get_read_orientation.py +++ b/tests/test_get_read_orientation.py @@ -73,6 +73,10 @@ def test_init_all(self, tmpdir): CONFIG.args.path_2_processed = FILE_MATE_2 CONFIG.args.t_file_processed = FILE_TRANSCRIPTS CONFIG.args.tmp_dir = tmpdir + CONFIG.results.library_source = ResultsSource( + file_1=Source(), + file_2=Source() + ) test_instance = GetOrientation(config=CONFIG, mapping=MAPPING) assert test_instance.paths[0] == FILE_MATE_1