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Fix CI

Fix CI #587

Triggered via push December 22, 2024 19:31
Status Failure
Total duration 13m 0s
Artifacts

ci.yml

on: push
snakemake-graphs-format
1m 53s
snakemake-graphs-format
integration-singularity
10m 52s
integration-singularity
integration-singularity-tempflag
8m 48s
integration-singularity-tempflag
integration-singularity-MultipleLanes
9m 6s
integration-singularity-MultipleLanes
integration-conda
5m 5s
integration-conda
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1 error and 15 warnings
integration-conda
Process completed with exit code 1.
snakemake-graphs-format
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
snakemake-graphs-format
CondaKeyError: 'channels': value 'defaults' not present in config
snakemake-graphs-format
/usr/share/miniconda/lib/python3.12/argparse.py:2000: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)
integration-conda
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
integration-conda
CondaKeyError: 'channels': value 'defaults' not present in config
integration-conda
/usr/share/miniconda/lib/python3.12/argparse.py:2000: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)
integration-singularity-tempflag
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
integration-singularity-tempflag
CondaKeyError: 'channels': value 'defaults' not present in config
integration-singularity-tempflag
/usr/share/miniconda/lib/python3.12/argparse.py:2000: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)
integration-singularity-MultipleLanes
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
integration-singularity-MultipleLanes
CondaKeyError: 'channels': value 'defaults' not present in config
integration-singularity-MultipleLanes
/usr/share/miniconda/lib/python3.12/argparse.py:2000: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)
integration-singularity
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
integration-singularity
CondaKeyError: 'channels': value 'defaults' not present in config
integration-singularity
/usr/share/miniconda/lib/python3.12/argparse.py:2000: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)