0.6.1

Fixed

• Progress bar not being disabled by -q flag in CLI.
• Fallback to using HMM name if accession is not available in PyHMMER.
• Group genes by source contig and process them separately in PyHMMER to avoid bogus E-values.

Added

• psutil dependency to get the number of physical CPU cores on the host machine.
• Support for using an arbitrary mapping of positives to negatives in gecco embed.

Removed

• Unused and outdated HMMER and DomainRow classes from gecco.hmmer.