Skip to content

v0.9.6

Compare
Choose a tag to compare
@github-actions github-actions released this 11 Jan 19:36

Added

  • Gene Ontology annotations to gecco.interpro local metadata.
  • Reference to Gene Ontology terms and derived functions to gecco.model.Domain objects.
  • Gene color based on predicted function in gecco.model.Gene.to_seq_feature.

Fixed

  • Missing gzip import in the CLI preventing usage of gzip-compressed inputs.
  • Invalid coordinates of domains found in reverse-strand genes.
  • Detection of entry points with importlib.metadata on older Python versions.

Changed

  • bgc_id columns of cluster tables are renamed cluster_id.
  • gecco.model.ProductType is renamed to gecco.model.ClusterType.
  • Bumped pyrodigal dependency to v2.0.
  • Bumped pyhmmer dependency to v0.7.