v0.9.7

Added

• Command line option to annotate proteins using bitscore cutoffs from HMMs.
• Command line option to disentangle overlapping domains after HMM annotation.

Changed

• Bump pyhmmer dependency to v0.8.0.
• Bump pyrodigal dependency to v2.1.0.
• Rewrite gecco.model to use polars for managing tabular data.
• Replace pandas dependencies with polars
• Update gecco run to skip type classification for tasks without an assigned cluster type.

Fixed

• Cluster.to_seq_record crashing when called on a cluster with types attribute unset.
• Progress bar resetting when performing domain annotation with multiple HMMs.

Removed

• Support for Python 3.7.