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For creating a new username and retrieving an API key, visit ParaKnowledge AI. For support, contact research@paraknowledge.ai.

ParaKnowledge AI

zcor_predict

Single Patient IPF target

curl -X POST -H "Content-Type: application/json" -d '[{"patient_id": "P000012", "sex": "M", "age": 89, "birth_date": "01-01-1921", "fips": "35644", "DX_record": [{"date": "01-05-2012", "code": "G35"}, {"date": "02-02-2012", "code": "H35.359"}, {"date": "03-29-2012", "code": "G35"}, {"date": "04-05-2012", "code": "R94.09"}, {"date": "04-05-2012", "code": "G35"}, {"date": "06-21-2012", "code": "G35"}], "RX_record": [], "PROC_record": [{"date": "03-29-2012", "code": "72170"}]}]' "https://us-central1-pkcsaas-01.cloudfunctions.net/zcor_predict?target=IPF&api_key=APIKEY"

Single Patient ILD target

curl -X POST -H "Content-Type: application/json" -d '[{"patient_id": "P000012", "sex": "M", "age": 89, "birth_date": "01-01-1921", "fips": "35644", "DX_record": [{"date": "01-05-2012", "code": "G35"}, {"date": "02-02-2012", "code": "H35.359"}, {"date": "03-29-2012", "code": "G35"}, {"date": "04-05-2012", "code": "R94.09"}, {"date": "04-05-2012", "code": "G35"}, {"date": "06-21-2012", "code": "G35"}], "RX_record": [], "PROC_record": [{"date": "03-29-2012", "code": "72170"}]}]' "https://us-central1-pkcsaas-01.cloudfunctions.net/zcor_predict?target=ILD&api_key=APIKEY"

Multiple patient data in file

curl -s -X POST -H "Content-Type: application/json" -d @sampledata/patients_10.json "https://us-central1-pkcsaas-01.cloudfunctions.net/zcor_predict?target=IPF&api_key=APIKEY"

Replace APIKEY with a valid api-key obtained by emailing support.

Introduction

zcor_predict is an EHR-based predictive algorithm designed to screen for a range of disorders using electronic health records. This tool currently supports screening for the following targets:

  • IPF (Idiopathic Pulmonary Fibrosis)
  • ILD (Interstitial Lung Disease)
  • ASD (Autism Spectrum Disorder, only for young children)
  • ADRD (Alzheimer's Disease and Related Dementia) pending

Estimated Performance

API Documentation

zcor_predict is deployed as a cloud function and can be accessed via the following URL endpoint:

https://us-central1-pkcsaas-01.cloudfunctions.net/zcor_predict?target=TARGET&api_key=YOUR_API_KEY

Replace TARGET with either IPF or ASD, and YOUR_API_KEY with your actual API key. The service responds to POST requests containing patient data encoded as a JSON object.

Ultra-fast In-memory Implementation

zcor_predict_fast

https://us-central1-pkcsaas-01.cloudfunctions.net/zcor_predict_fast?target=TARGET&api_key=YOUR_API_KEY

Input Format

The input should be a JSON object that consists of a list of dictionaries. Each dictionary contains a single patient record with the following fields:

  • patient_id (required)
  • birth_date (required) - Format: "MM-DD-YYYY".
  • sex (optional) - Defaults to "F" if not provided.
  • DX_record (required) - A list of dictionaries containing the patient's diagnostic codes in ICD10 or ICD9 format (code), along with the date of diagnosis (date).
  • RX_record (optional, required for certain targets) - A list of dictionaries with the patient's prescription codes in NDC format (code), and the date of prescription (date).
  • PROC_record (optional, required for certain targets) - A list of dictionaries with the patient's procedural codes in ICD, CPT, or HCPCS format (code), and the date of the procedure (date).

Minimum Requirements:

  • Essential fields: patient_id, birth_date, and DX_record.
  • DX_record must have at least 2 diagnosis codes, recorded at least 1 week apart.
  • We recommend a minimum 5 diagnosis codes in medical history for flags to be reliable

Output Format

The service returns a JSON object with predictions, structured as follows:

{
  "predictions": [
    {
      "error_code": "",
      "patient_id": "P000012",
      "predicted_risk": 0.005794344620009157,
      "probability": 0.8253881317184486
    }
  ],
  "target": "TARGET"
}

In this structure, TARGET will be either IPF or ASD, depending on the specified target in the request. Each entry in the predictions array corresponds to a patient's risk prediction for the specified disorder.

Interpretation

The probability is the probability of a patient to experience the target disorder in near future (the length of this future depends on the model, but currently the "prediction window" is 1 year). We recommend that for relable prediction, use decision thersholds greater than 90% or higher on this estimated probability.

Example Inputs

json input for Single Patient

[
    {
        "patient_id": "P000038",
        "sex": "F",
        "birth_date": "01-01-2006",
        "DX_record": [
            {"date": "07-31-2006", "code": "Z38.00"},
            {"date": "08-07-2006", "code": "P59.9"},
            {"date": "08-29-2016", "code": "J01.90"},
            {"date": "09-10-2016", "code": "J01.90"},
            {"date": "11-14-2016", "code": "J01.91"}
        ],
        "RX_record": [
            {"date": "10-29-2011", "code": "rxLDA017"},
            {"date": "05-16-2015", "code": "rxIDG004"},
            {"date": "08-08-2015", "code": "rxIDG004"},
            {"date": "06-04-2016", "code": "rxIDD013"}
        ],
        "PROC_record": [
            {"date": "02-05-2007", "code": "90723"},
            {"date": "11-05-2007", "code": "J1100"}
        ]
    }
]

Runtime

Disease Runtime (s) for 1 Patient Runtime (s) for 1000 Patients
ADRD 27.8825 1359.7784
ASD 11.6790 371.0477
ILD 26.5180 610.5329
IPF 12.9410 465.9096

For larger number of patients, the time perpatient is approximatley 1 second or less for most targets.

Pricing

For information on pricing and plans, please contact our support team at research@paraknowledge.ai. We offer various pricing models to cater to different needs, including per-use, subscription-based, and enterprise solutions.

Additional Information

  • Regular updates and maintenance schedules are posted on our website.
  • For API integration and technical queries, consult our detailed API Documentation.
  • Users are encouraged to report any bugs or issues via our support email.

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