DESCRIPTION

Package: SCOM
Type: Package
Title: Inferring ncRNA synergistic competition
Version: 0.99.0
Authors@R: 
    person(given = "Junpeng", 
           family = "Zhang", 
           role=c("aut", "cre"), 
           email = "zhangjunpeng411@gmail.com")
Description: The package aims to infer ncRNA synergistic competition from transcriptomics data and putative miRNA-target interactions.
    It provides several functions to study ncRNA synergistic competition, including a function for inferring ceRNA networks 
    , and a function to identify ncRNA synergistic competition networks, as well as several functions to conduct downstream
    analysis of the synergistic competition ncRNAs.
Depends: R (>= 4.3.0)
License: GPL-3
URL: https://github.com/zhangjunpeng411/SCOM
Encoding: UTF-8
biocViews: GeneExpression, BiomedicalInformatics, 
           Clustering, GeneSetEnrichment, Microarray, 
	         Software, GeneRegulation, GeneTarget
RoxygenNote: 7.2.3
Imports: SPONGE,
    doParallel,
    e1071,
    foreach,
    parallel,
    igraph,
    mldr,
    utiml,
    WGCNA,
    corpcor,
    stringr,
    stats
Suggests: BiocStyle, 
    knitr,
    rmarkdown,
    testthat
VignetteBuilder: knitr
BugReports: https://github.com/zhangjunpeng411/SCOM/issues