diff --git a/R/ConvVCF2GDS.R b/R/ConvVCF2GDS.R index 27de939..3e01d6b 100644 --- a/R/ConvVCF2GDS.R +++ b/R/ConvVCF2GDS.R @@ -756,7 +756,10 @@ seqVCF2GDS <- function(vcf.fn, out.fn, header=NULL, if (verbose) { cat(" # of cores/jobs: ", pnum, "\n", sep="") - cat(" calculating the total number of variants ...\n") + cat(" calculating the total number of variants") + if (requireNamespace("Rsamtools", quietly=TRUE)) + cat(" using Rsamtools") + cat(" ...\n") flush.console() }